Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RIPK2O43353 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.71■□□□□ 0.11
RIPK2O43353 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.71■□□□□ 0.11
RIPK2O43353 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
RIPK2O43353 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.71■□□□□ 0.11
RIPK2O43353 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RIPK2O43353 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.71■□□□□ 0.11
RIPK2O43353 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RIPK2O43353 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.71■□□□□ 0.11
RIPK2O43353 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
RIPK2O43353 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RIPK2O43353 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
RIPK2O43353 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.71■□□□□ 0.11
RIPK2O43353 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RIPK2O43353 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RIPK2O43353 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.71■□□□□ 0.11
RIPK2O43353 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.71■□□□□ 0.11
RIPK2O43353 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.71■□□□□ 0.11
RIPK2O43353 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.71■□□□□ 0.11
RIPK2O43353 OR2I1P-209ENST00000641730 5365 ntBASIC15.71■□□□□ 0.11
RIPK2O43353 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RIPK2O43353 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RIPK2O43353 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.71■□□□□ 0.1
RIPK2O43353 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.71■□□□□ 0.1
RIPK2O43353 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RIPK2O43353 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.71■□□□□ 0.1
RIPK2O43353 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RIPK2O43353 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.7■□□□□ 0.1
RIPK2O43353 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RIPK2O43353 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.7■□□□□ 0.1
RIPK2O43353 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.7■□□□□ 0.1
RIPK2O43353 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.7■□□□□ 0.1
RIPK2O43353 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.7■□□□□ 0.1
RIPK2O43353 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.7■□□□□ 0.1
RIPK2O43353 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.7■□□□□ 0.1
RIPK2O43353 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 TARDBPP1-201ENST00000442013 1203 ntBASIC15.7■□□□□ 0.1
RIPK2O43353 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.7■□□□□ 0.1
RIPK2O43353 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.7■□□□□ 0.1
RIPK2O43353 KRT8P23-201ENST00000560090 1207 ntBASIC15.7■□□□□ 0.1
RIPK2O43353 SLC25A6P4-201ENST00000586535 553 ntBASIC15.7■□□□□ 0.1
RIPK2O43353 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.7■□□□□ 0.1
RIPK2O43353 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.7■□□□□ 0.1
RIPK2O43353 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.7■□□□□ 0.1
RIPK2O43353 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RIPK2O43353 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RIPK2O43353 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.7■□□□□ 0.1
RIPK2O43353 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RIPK2O43353 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.7■□□□□ 0.1
RIPK2O43353 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RIPK2O43353 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RIPK2O43353 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIPK2O43353 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RIPK2O43353 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.69■□□□□ 0.1
RIPK2O43353 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.69■□□□□ 0.1
RIPK2O43353 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.69■□□□□ 0.1
RIPK2O43353 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.69■□□□□ 0.1
RIPK2O43353 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms