Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.79■□□□□ 0.92
CHD2O14647 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.79■□□□□ 0.92
CHD2O14647 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.79■□□□□ 0.92
CHD2O14647 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHD2O14647 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CHD2O14647 AC006158.1-201ENST00000610661 249 ntBASIC20.79■□□□□ 0.92
CHD2O14647 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHD2O14647 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHD2O14647 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC20.79■□□□□ 0.92
CHD2O14647 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CHD2O14647 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD2O14647 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD2O14647 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD2O14647 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD2O14647 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.79■□□□□ 0.92
CHD2O14647 NHP2-202ENST00000314397 599 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD2O14647 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 AL354861.1-201ENST00000445213 355 ntBASIC20.78■□□□□ 0.92
CHD2O14647 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD2O14647 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.78■□□□□ 0.92
CHD2O14647 AP000911.2-201ENST00000534330 502 ntBASIC20.78■□□□□ 0.92
CHD2O14647 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC20.78■□□□□ 0.92
CHD2O14647 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC20.78■□□□□ 0.92
CHD2O14647 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC20.78■□□□□ 0.92
CHD2O14647 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHD2O14647 AC011247.3-201ENST00000603297 438 ntBASIC20.78■□□□□ 0.92
CHD2O14647 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC20.78■□□□□ 0.92
CHD2O14647 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD2O14647 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CHD2O14647 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CHD2O14647 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD2O14647 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CHD2O14647 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC20.78■□□□□ 0.92
CHD2O14647 AL592076.1-201ENST00000424448 303 ntBASIC20.78■□□□□ 0.92
CHD2O14647 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC20.78■□□□□ 0.92
CHD2O14647 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CHD2O14647 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD2O14647 AC027601.3-201ENST00000622907 509 ntBASIC20.78■□□□□ 0.92
CHD2O14647 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHD2O14647 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CHD2O14647 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHD2O14647 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.78■□□□□ 0.92
CHD2O14647 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.77■□□□□ 0.92
CHD2O14647 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD2O14647 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD2O14647 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC20.77■□□□□ 0.92
CHD2O14647 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD2O14647 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHD2O14647 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.77■□□□□ 0.92
CHD2O14647 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC20.77■□□□□ 0.92
CHD2O14647 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC20.77■□□□□ 0.92
CHD2O14647 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHD2O14647 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHD2O14647 STK16-203ENST00000409516 895 ntTSL 2 BASIC20.77■□□□□ 0.92
CHD2O14647 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC20.77■□□□□ 0.92
CHD2O14647 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHD2O14647 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC20.77■□□□□ 0.92
CHD2O14647 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC20.77■□□□□ 0.92
CHD2O14647 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC20.77■□□□□ 0.92
CHD2O14647 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC20.77■□□□□ 0.92
CHD2O14647 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC20.77■□□□□ 0.92
CHD2O14647 AP003392.6-201ENST00000607709 325 ntBASIC20.77■□□□□ 0.92
CHD2O14647 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC20.77■□□□□ 0.92
CHD2O14647 AC073592.2-201ENST00000623062 780 ntBASIC20.77■□□□□ 0.92
CHD2O14647 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHD2O14647 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHD2O14647 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC20.77■□□□□ 0.92
CHD2O14647 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHD2O14647 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD2O14647 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD2O14647 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHD2O14647 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHD2O14647 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CHD2O14647 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD2O14647 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CHD2O14647 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD2O14647 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CHD2O14647 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD2O14647 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC20.76■□□□□ 0.91
CHD2O14647 FAU-202ENST00000434372 533 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD2O14647 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD2O14647 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC20.76■□□□□ 0.91
CHD2O14647 NAMA-206ENST00000605377 509 ntTSL 5 BASIC20.76■□□□□ 0.91
CHD2O14647 LINC00431-202ENST00000636375 159 ntBASIC20.76■□□□□ 0.91
CHD2O14647 AL590440.2-201ENST00000641973 1595 ntBASIC20.76■□□□□ 0.91
CHD2O14647 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD2O14647 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms