Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 ELK1P1-201ENST00000485699 580 ntBASIC14.67□□□□□ -0.06
LRIT2A6NDA9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 AC023824.1-201ENST00000562945 2975 ntBASIC14.67□□□□□ -0.06
LRIT2A6NDA9 AC120045.2-201ENST00000567334 178 ntBASIC14.67□□□□□ -0.06
LRIT2A6NDA9 AC140912.1-201ENST00000577171 1054 ntBASIC14.67□□□□□ -0.06
LRIT2A6NDA9 AP000845.1-201ENST00000581677 2131 ntBASIC14.67□□□□□ -0.06
LRIT2A6NDA9 AC138761.1-201ENST00000584393 385 ntBASIC14.67□□□□□ -0.06
LRIT2A6NDA9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 REXO1L4P-201ENST00000605109 1937 ntBASIC14.66□□□□□ -0.06
LRIT2A6NDA9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 AC007787.1-201ENST00000588095 1583 ntBASIC14.66□□□□□ -0.06
LRIT2A6NDA9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 CRB3P1-201ENST00000449338 276 ntBASIC14.66□□□□□ -0.06
LRIT2A6NDA9 TP53TG3HP-202ENST00000569755 579 ntBASIC14.66□□□□□ -0.06
LRIT2A6NDA9 SPDYE22P-201ENST00000582158 798 ntBASIC14.66□□□□□ -0.06
LRIT2A6NDA9 CTBP2P3-201ENST00000585629 1255 ntBASIC14.66□□□□□ -0.06
LRIT2A6NDA9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRIT2A6NDA9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 ZBED1P1-201ENST00000502364 1930 ntBASIC14.65□□□□□ -0.06
LRIT2A6NDA9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms