Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 SLC25A6P4-201ENST00000586535 553 ntBASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 HLA-A-201ENST00000376802 1334 ntBASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 AC041040.2-201ENST00000622926 2899 ntBASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 PTENP1-202ENST00000532280 3996 ntBASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 HLA-H-201ENST00000383620 1096 ntBASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 AC145285.3-201ENST00000564603 959 ntBASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms