Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 NFIC-211ENST00000641145 8399 ntBASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 AC069224.1-201ENST00000566372 1715 ntBASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 MIR6787-201ENST00000616675 61 ntBASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 AC020907.1-201ENST00000616460 1350 ntBASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 AC114812.1-204ENST00000449669 728 ntBASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 AC145423.3-201ENST00000615987 467 ntBASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 AC099063.4-201ENST00000641099 1602 ntBASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 KRT8P35-201ENST00000483942 1338 ntBASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 AL133338.1-201ENST00000565695 1517 ntBASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CSNK1G3Q9Y6M4 KRT8P44-201ENST00000441609 1350 ntBASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms