Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 AC148477.4-201ENST00000613430 1793 ntBASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCDHGA11Q9Y5H2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
PCDHGA11Q9Y5H2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.05■□□□□ 0
PCDHGA11Q9Y5H2 LINC00528-201ENST00000600723 2160 ntBASIC15.05■□□□□ 0
PCDHGA11Q9Y5H2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
PCDHGA11Q9Y5H2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.05■□□□□ 0
PCDHGA11Q9Y5H2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
PCDHGA11Q9Y5H2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDHGA11Q9Y5H2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCDHGA11Q9Y5H2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 AL133267.1-201ENST00000398220 340 ntBASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 AC015922.1-201ENST00000421102 1152 ntBASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 RPL13P2-201ENST00000440687 659 ntBASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 KRT18P28-201ENST00000453838 1332 ntBASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
PCDHGA11Q9Y5H2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 AC097493.3-201ENST00000509725 367 ntBASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 ZNF890P-202ENST00000530367 1156 ntBASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 AC015910.1-201ENST00000579400 975 ntBASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms