Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 RPS2P1-201ENST00000434010 821 ntBASIC14.67□□□□□ -0.06
AP4S1Q9Y587 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 AP000845.1-201ENST00000581677 2131 ntBASIC14.67□□□□□ -0.06
AP4S1Q9Y587 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 AC005593.1-201ENST00000624894 515 ntBASIC14.67□□□□□ -0.06
AP4S1Q9Y587 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 AC015802.1-201ENST00000588104 1449 ntBASIC14.66□□□□□ -0.06
AP4S1Q9Y587 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 RPS8P6-201ENST00000426177 609 ntBASIC14.66□□□□□ -0.06
AP4S1Q9Y587 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms