Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC17.83■□□□□ 0.45
R3HCC1Q9Y3T6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.83■□□□□ 0.45
R3HCC1Q9Y3T6 UXT-AS1-201ENST00000590504 1525 ntBASIC17.83■□□□□ 0.45
R3HCC1Q9Y3T6 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC17.83■□□□□ 0.45
R3HCC1Q9Y3T6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
R3HCC1Q9Y3T6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
R3HCC1Q9Y3T6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
R3HCC1Q9Y3T6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 AC112693.3-201ENST00000624819 1983 ntBASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 DNAJB3-202ENST00000449667 1266 ntBASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 AC079140.1-201ENST00000508039 487 ntBASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 PCGF3-213ENST00000620529 1899 ntBASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
R3HCC1Q9Y3T6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 AC140479.7-201ENST00000636301 2332 ntBASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 BEND3P1-201ENST00000421591 1944 ntBASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
R3HCC1Q9Y3T6 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 AC027601.5-201ENST00000624065 2482 ntBASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms