Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 AC004449.1-201ENST00000564240 433 ntBASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 TEX28P1-201ENST00000613479 1221 ntBASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 TEX28P2-201ENST00000617764 1221 ntBASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 AF228730.6-201ENST00000641497 218 ntBASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 AC084121.3-201ENST00000641716 218 ntBASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF11Q9Y3C5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 CNN2P2-201ENST00000443536 909 ntBASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 CNN2P3-201ENST00000450201 906 ntBASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 HLA-V-204ENST00000476601 1289 ntBASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 SLED1-202ENST00000512051 380 ntBASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 AL136317.3-201ENST00000618497 906 ntBASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF11Q9Y3C5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms