Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 AC009090.5-201ENST00000624886 2285 ntBASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 FLJ16779-201ENST00000612722 7638 ntBASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 AC092127.1-201ENST00000567093 3455 ntBASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 IGHV3-42-201ENST00000520410 361 ntBASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 AC010336.2-201ENST00000564226 506 ntBASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 AC025048.3-201ENST00000590609 569 ntBASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 AC005702.4-201ENST00000618393 416 ntBASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAPPC4Q9Y296 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 BASP1P1-201ENST00000430708 665 ntBASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 TARDBPP1-201ENST00000442013 1203 ntBASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 AL512361.1-201ENST00000554200 418 ntBASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 BTBD7P1-201ENST00000447253 1453 ntBASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms