Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.94■□□□□ 0.3
L1RE1Q9UN81 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.94■□□□□ 0.3
L1RE1Q9UN81 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
L1RE1Q9UN81 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
L1RE1Q9UN81 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
L1RE1Q9UN81 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.94■□□□□ 0.3
L1RE1Q9UN81 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.94■□□□□ 0.3
L1RE1Q9UN81 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
L1RE1Q9UN81 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
L1RE1Q9UN81 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
L1RE1Q9UN81 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.94■□□□□ 0.3
L1RE1Q9UN81 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 C18orf15-201ENST00000623680 2534 ntBASIC16.93■□□□□ 0.3
L1RE1Q9UN81 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 KRT18P64-201ENST00000434946 1219 ntBASIC16.93■□□□□ 0.3
L1RE1Q9UN81 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 TIMM17BP1-201ENST00000545713 516 ntBASIC16.93■□□□□ 0.3
L1RE1Q9UN81 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 AC041040.2-201ENST00000622926 2899 ntBASIC16.93■□□□□ 0.3
L1RE1Q9UN81 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
L1RE1Q9UN81 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 SLC7A15P-201ENST00000424028 1363 ntBASIC16.92■□□□□ 0.3
L1RE1Q9UN81 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 AL353779.1-201ENST00000434793 351 ntBASIC16.92■□□□□ 0.3
L1RE1Q9UN81 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 AC105233.6-201ENST00000642093 218 ntBASIC16.92■□□□□ 0.3
L1RE1Q9UN81 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
L1RE1Q9UN81 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 AC007686.3-201ENST00000619017 3487 ntBASIC16.91■□□□□ 0.3
L1RE1Q9UN81 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.91■□□□□ 0.3
L1RE1Q9UN81 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms