Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 AL360270.3-201ENST00000609118 1348 ntBASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 AC007431.3-201ENST00000623221 587 ntBASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGC3Q9UN70 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGC3Q9UN70 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGC3Q9UN70 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHGC3Q9UN70 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PCDHGC3Q9UN70 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGC3Q9UN70 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGC3Q9UN70 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGC3Q9UN70 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGC3Q9UN70 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGC3Q9UN70 KRT8P22-201ENST00000562317 1415 ntBASIC16.27■□□□□ 0.19
PCDHGC3Q9UN70 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGC3Q9UN70 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGC3Q9UN70 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 MYCLP2-201ENST00000449268 967 ntBASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 ELK1P1-201ENST00000485699 580 ntBASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 AL359711.2-201ENST00000563105 872 ntBASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 PAX6-247ENST00000638965 979 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 PRSS30P-206ENST00000641773 873 ntBASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.26■□□□□ 0.19
PCDHGC3Q9UN70 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms