Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 RNA5SP416-201ENST00000516838 111 ntBASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 ZNF259P1-201ENST00000407656 1365 ntBASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 AP000845.1-201ENST00000581677 2131 ntBASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIMS3Q9UJD0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 AC099521.3-201ENST00000624251 2938 ntBASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 AC027612.1-201ENST00000445234 2395 ntBASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 RPL5P21-201ENST00000404620 815 ntBASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 AC027307.2-201ENST00000591252 911 ntBASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIMS3Q9UJD0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms