Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MKS1Q9NXB0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 AC023274.1-201ENST00000418278 595 ntBASIC15.24■□□□□ 0.03
MKS1Q9NXB0 AL590627.1-203ENST00000421194 1026 ntBASIC15.24■□□□□ 0.03
MKS1Q9NXB0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 AC025048.3-201ENST00000590609 569 ntBASIC15.24■□□□□ 0.03
MKS1Q9NXB0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 BX640515.1-201ENST00000617215 977 ntBASIC15.24■□□□□ 0.03
MKS1Q9NXB0 AC005702.4-201ENST00000618393 416 ntBASIC15.24■□□□□ 0.03
MKS1Q9NXB0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.24■□□□□ 0.03
MKS1Q9NXB0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 INTS4P1-203ENST00000641008 3683 ntBASIC15.23■□□□□ 0.03
MKS1Q9NXB0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 AL359881.3-201ENST00000602640 1721 ntBASIC15.23■□□□□ 0.03
MKS1Q9NXB0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.23■□□□□ 0.03
MKS1Q9NXB0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms