Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 AC004461.2-201ENST00000629517 803 ntBASIC16.35■□□□□ 0.21
CD248Q9HCU0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 SLC7A15P-201ENST00000424028 1363 ntBASIC16.35■□□□□ 0.21
CD248Q9HCU0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.35■□□□□ 0.21
CD248Q9HCU0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD248Q9HCU0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 AC136621.1-201ENST00000624017 2304 ntBASIC16.34■□□□□ 0.21
CD248Q9HCU0 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 ARSEP1-201ENST00000420443 635 ntBASIC16.34■□□□□ 0.21
CD248Q9HCU0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 HIST3H2BA-201ENST00000436555 524 ntBASIC16.34■□□□□ 0.21
CD248Q9HCU0 AC007274.1-201ENST00000439805 662 ntBASIC16.34■□□□□ 0.21
CD248Q9HCU0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 AL589987.1-201ENST00000453380 819 ntBASIC16.34■□□□□ 0.21
CD248Q9HCU0 SDHAP3-202ENST00000515467 728 ntBASIC16.34■□□□□ 0.21
CD248Q9HCU0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 AL008721.1-201ENST00000609964 604 ntBASIC16.34■□□□□ 0.21
CD248Q9HCU0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 AC010327.5-201ENST00000586923 3061 ntBASIC16.34■□□□□ 0.21
CD248Q9HCU0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.34■□□□□ 0.21
CD248Q9HCU0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD248Q9HCU0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms