Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.77■□□□□ 0.27
HIPK3Q9H422 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK3Q9H422 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK3Q9H422 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK3Q9H422 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.77■□□□□ 0.27
HIPK3Q9H422 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.77■□□□□ 0.27
HIPK3Q9H422 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK3Q9H422 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.77■□□□□ 0.27
HIPK3Q9H422 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK3Q9H422 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK3Q9H422 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK3Q9H422 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK3Q9H422 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
HIPK3Q9H422 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK3Q9H422 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.77■□□□□ 0.27
HIPK3Q9H422 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIPK3Q9H422 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIPK3Q9H422 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIPK3Q9H422 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIPK3Q9H422 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIPK3Q9H422 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIPK3Q9H422 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIPK3Q9H422 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIPK3Q9H422 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 AC007274.2-201ENST00000421675 662 ntBASIC16.76■□□□□ 0.27
HIPK3Q9H422 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 PRKXP1-201ENST00000561423 1122 ntBASIC16.76■□□□□ 0.27
HIPK3Q9H422 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 AC013355.1-201ENST00000562625 723 ntBASIC16.76■□□□□ 0.27
HIPK3Q9H422 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 AL133499.1-201ENST00000596207 608 ntBASIC16.76■□□□□ 0.27
HIPK3Q9H422 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 AC026740.1-201ENST00000607068 791 ntBASIC16.76■□□□□ 0.27
HIPK3Q9H422 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIPK3Q9H422 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIPK3Q9H422 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIPK3Q9H422 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIPK3Q9H422 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIPK3Q9H422 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.76■□□□□ 0.27
HIPK3Q9H422 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIPK3Q9H422 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIPK3Q9H422 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIPK3Q9H422 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIPK3Q9H422 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.75■□□□□ 0.27
HIPK3Q9H422 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIPK3Q9H422 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIPK3Q9H422 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIPK3Q9H422 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIPK3Q9H422 DPM3-202ENST00000368399 517 ntBASIC16.75■□□□□ 0.27
HIPK3Q9H422 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIPK3Q9H422 AL136309.1-201ENST00000403917 691 ntBASIC16.75■□□□□ 0.27
HIPK3Q9H422 ACTG1P2-201ENST00000415776 1125 ntBASIC16.75■□□□□ 0.27
HIPK3Q9H422 ACTG1P11-201ENST00000425411 1125 ntBASIC16.75■□□□□ 0.27
HIPK3Q9H422 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIPK3Q9H422 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIPK3Q9H422 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIPK3Q9H422 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.75■□□□□ 0.27
HIPK3Q9H422 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIPK3Q9H422 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIPK3Q9H422 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIPK3Q9H422 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 AC092978.1-202ENST00000637590 1327 ntBASIC16.74■□□□□ 0.27
HIPK3Q9H422 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms