Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.72□□□□□ -0.37
SMIM3Q9BZL3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM3Q9BZL3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.72□□□□□ -0.37
SMIM3Q9BZL3 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM3Q9BZL3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.72□□□□□ -0.37
SMIM3Q9BZL3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM3Q9BZL3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 AL359183.1-201ENST00000623796 2132 ntBASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 AP001267.2-201ENST00000532619 2086 ntBASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 AP002383.4-201ENST00000442518 975 ntBASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 AC104076.2-201ENST00000448912 469 ntBASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM3Q9BZL3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 AC092135.3-201ENST00000624151 1846 ntBASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 REXO1L2P-201ENST00000425429 2069 ntBASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
SMIM3Q9BZL3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 AC113367.3-201ENST00000508316 1912 ntBASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 WASH3P-207ENST00000560956 1394 ntBASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 FO538757.1-201ENST00000623083 1397 ntBASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SMIM3Q9BZL3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms