Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 MIR4469-201ENST00000583919 79 ntBASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 AC007191.1-201ENST00000623179 2995 ntBASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 INTS4P1-203ENST00000641008 3683 ntBASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.87□□□□□ -0.03
THUMPD3Q9BV44 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 HLA-H-201ENST00000383620 1096 ntBASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 RPSAP43-201ENST00000402237 625 ntBASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 UPF3AP3-201ENST00000420996 769 ntBASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 AL592309.1-201ENST00000443127 649 ntBASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THUMPD3Q9BV44 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
THUMPD3Q9BV44 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
THUMPD3Q9BV44 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.85□□□□□ -0.03
THUMPD3Q9BV44 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
THUMPD3Q9BV44 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
THUMPD3Q9BV44 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
THUMPD3Q9BV44 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.85□□□□□ -0.03
THUMPD3Q9BV44 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.85□□□□□ -0.03
THUMPD3Q9BV44 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
THUMPD3Q9BV44 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
THUMPD3Q9BV44 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.85□□□□□ -0.03
THUMPD3Q9BV44 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.85□□□□□ -0.03
THUMPD3Q9BV44 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
THUMPD3Q9BV44 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.85□□□□□ -0.03
THUMPD3Q9BV44 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms