Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 HCG4-201ENST00000418983 998 ntBASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 AC005412.3-201ENST00000580309 715 ntBASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 MPDU1-223ENST00000582151 728 ntBASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 AC004790.2-201ENST00000623588 572 ntBASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 KRT8P39-201ENST00000396270 1433 ntBASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 PI4KAP1-204ENST00000612579 1703 ntBASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 AL353732.1-201ENST00000569618 1459 ntBASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.08□□□□□ -0.48
NDUFAF3Q9BU61 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 PTCHD3P3-201ENST00000403073 906 ntBASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 POU5F1P6-201ENST00000466990 990 ntBASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 GGT4P-201ENST00000623672 1708 ntBASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 AC129492.6-201ENST00000611383 1305 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms