Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 AL031595.1-201ENST00000623969 4709 ntBASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 AC018529.1-201ENST00000613063 361 ntBASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 MIR193BHG-211ENST00000641433 5365 ntBASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 KRT8P37-201ENST00000451609 1420 ntBASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHRDL1Q9BU40 AC026748.1-201ENST00000624349 3251 ntBASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 MROH4P-201ENST00000431302 1578 ntBASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms