Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC007551.1-201ENST00000457394 519 ntBASIC16.12■□□□□ 0.17
SMOQ99835 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SMOQ99835 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.12■□□□□ 0.17
SMOQ99835 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.12■□□□□ 0.17
SMOQ99835 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SMOQ99835 MIR4259-201ENST00000584466 101 ntBASIC16.12■□□□□ 0.17
SMOQ99835 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.12■□□□□ 0.17
SMOQ99835 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.12■□□□□ 0.17
SMOQ99835 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SMOQ99835 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.12■□□□□ 0.17
SMOQ99835 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
SMOQ99835 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SMOQ99835 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SMOQ99835 AL360270.3-201ENST00000609118 1348 ntBASIC16.12■□□□□ 0.17
SMOQ99835 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SMOQ99835 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SMOQ99835 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.12■□□□□ 0.17
SMOQ99835 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMOQ99835 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SMOQ99835 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.11■□□□□ 0.17
SMOQ99835 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SMOQ99835 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SMOQ99835 AC022532.1-201ENST00000624563 1728 ntBASIC16.11■□□□□ 0.17
SMOQ99835 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.11■□□□□ 0.17
SMOQ99835 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.11■□□□□ 0.17
SMOQ99835 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SMOQ99835 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SMOQ99835 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.11■□□□□ 0.17
SMOQ99835 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.11■□□□□ 0.17
SMOQ99835 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SMOQ99835 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.11■□□□□ 0.17
SMOQ99835 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.11■□□□□ 0.17
SMOQ99835 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SMOQ99835 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SMOQ99835 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.11■□□□□ 0.17
SMOQ99835 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.11■□□□□ 0.17
SMOQ99835 AC025279.2-201ENST00000569730 653 ntBASIC16.11■□□□□ 0.17
SMOQ99835 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.11■□□□□ 0.17
SMOQ99835 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.11■□□□□ 0.17
SMOQ99835 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 AC017083.2-201ENST00000608069 979 ntBASIC16.11■□□□□ 0.17
SMOQ99835 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SMOQ99835 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.11■□□□□ 0.17
SMOQ99835 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SMOQ99835 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMOQ99835 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.11■□□□□ 0.17
SMOQ99835 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.11■□□□□ 0.17
SMOQ99835 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SMOQ99835 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.11■□□□□ 0.17
SMOQ99835 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 AP000845.1-201ENST00000581677 2131 ntBASIC16.1■□□□□ 0.17
SMOQ99835 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.1■□□□□ 0.17
SMOQ99835 AC012508.2-201ENST00000567613 1472 ntBASIC16.1■□□□□ 0.17
SMOQ99835 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.1■□□□□ 0.17
SMOQ99835 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.1■□□□□ 0.17
SMOQ99835 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SMOQ99835 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
SMOQ99835 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.1■□□□□ 0.17
SMOQ99835 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.1■□□□□ 0.17
SMOQ99835 BOLA2P3-201ENST00000404566 256 ntBASIC16.1■□□□□ 0.17
SMOQ99835 AC016694.1-201ENST00000434179 700 ntBASIC16.1■□□□□ 0.17
SMOQ99835 EIF3FP3-201ENST00000434851 1086 ntBASIC16.1■□□□□ 0.17
SMOQ99835 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.1■□□□□ 0.17
SMOQ99835 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.1■□□□□ 0.17
SMOQ99835 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms