Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 AL139094.1-201ENST00000405549 1188 ntBASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK5RAP1Q96SZ6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 AL158070.2-201ENST00000623713 1621 ntBASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 AC022210.1-201ENST00000449856 793 ntBASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 KLF2P4-201ENST00000451959 1225 ntBASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 AC104989.1-201ENST00000519711 778 ntBASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 AC133552.6-201ENST00000613406 534 ntBASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 MIR6752-201ENST00000618442 71 ntBASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 TMBIM7P-203ENST00000641617 1718 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms