Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 GOLGA2P4-201ENST00000441462 777 ntBASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 AC114812.1-204ENST00000449669 728 ntBASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 DUX4L45-201ENST00000566406 1057 ntBASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 AL118558.3-201ENST00000607414 1079 ntBASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 AC132938.4-201ENST00000623835 848 ntBASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC85AQ96PX6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC85AQ96PX6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 AC004066.1-201ENST00000502488 802 ntBASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 C2orf69P2-201ENST00000562032 1123 ntBASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms