Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 AC012441.1-201ENST00000446669 685 ntBASIC12.6□□□□□ -0.39
ZNF48Q96MX3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 AC009486.1-201ENST00000569860 813 ntBASIC12.6□□□□□ -0.39
ZNF48Q96MX3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 AC244669.2-201ENST00000612320 853 ntBASIC12.6□□□□□ -0.39
ZNF48Q96MX3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 HYMAI-201ENST00000635591 3347 ntBASIC12.6□□□□□ -0.39
ZNF48Q96MX3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF48Q96MX3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 FO681548.1-201ENST00000455617 1132 ntBASIC12.59□□□□□ -0.39
ZNF48Q96MX3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 AP000812.2-201ENST00000538934 718 ntBASIC12.59□□□□□ -0.39
ZNF48Q96MX3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 AP001063.1-201ENST00000568332 529 ntBASIC12.59□□□□□ -0.39
ZNF48Q96MX3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 RN7SL219P-201ENST00000582872 296 ntBASIC12.59□□□□□ -0.39
ZNF48Q96MX3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms