Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 AC239868.1-201ENST00000369385 493 ntBASIC17.78■□□□□ 0.44
CDCA5Q96FF9 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 RPL7P35-201ENST00000446943 740 ntBASIC17.78■□□□□ 0.44
CDCA5Q96FF9 RN7SL67P-201ENST00000492147 296 ntBASIC17.78■□□□□ 0.44
CDCA5Q96FF9 AP002803.1-201ENST00000528836 498 ntBASIC17.78■□□□□ 0.44
CDCA5Q96FF9 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 MIR6756-201ENST00000616240 63 ntBASIC17.78■□□□□ 0.44
CDCA5Q96FF9 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 LTB4R2-202ENST00000528054 3092 ntBASIC17.78■□□□□ 0.44
CDCA5Q96FF9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 CAP2P1-201ENST00000557743 1390 ntBASIC17.78■□□□□ 0.44
CDCA5Q96FF9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 AC244394.1-201ENST00000435000 1665 ntBASIC17.77■□□□□ 0.44
CDCA5Q96FF9 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 AL008718.2-201ENST00000609206 1313 ntBASIC17.77■□□□□ 0.44
CDCA5Q96FF9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 AC020916.1-201ENST00000587762 1774 ntBASIC17.77■□□□□ 0.44
CDCA5Q96FF9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 AP000356.3-201ENST00000382243 753 ntBASIC17.77■□□□□ 0.44
CDCA5Q96FF9 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 SCARNA21-201ENST00000517026 139 ntBASIC17.77■□□□□ 0.44
CDCA5Q96FF9 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 AC138696.2-201ENST00000607376 223 ntBASIC17.77■□□□□ 0.44
CDCA5Q96FF9 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA5Q96FF9 AC025271.4-201ENST00000621477 1726 ntBASIC17.77■□□□□ 0.44
CDCA5Q96FF9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
CDCA5Q96FF9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDCA5Q96FF9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDCA5Q96FF9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDCA5Q96FF9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CDCA5Q96FF9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CDCA5Q96FF9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.77■□□□□ 0.43
CDCA5Q96FF9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.77■□□□□ 0.43
CDCA5Q96FF9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDCA5Q96FF9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDCA5Q96FF9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 RPL8P2-201ENST00000430538 502 ntBASIC17.76■□□□□ 0.43
CDCA5Q96FF9 AC012441.2-201ENST00000444843 739 ntBASIC17.76■□□□□ 0.43
CDCA5Q96FF9 AC079112.1-201ENST00000454972 939 ntBASIC17.76■□□□□ 0.43
CDCA5Q96FF9 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 RN7SL258P-201ENST00000478664 300 ntBASIC17.76■□□□□ 0.43
CDCA5Q96FF9 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 DNM1P30-201ENST00000563586 452 ntBASIC17.76■□□□□ 0.43
CDCA5Q96FF9 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 AC026803.1-201ENST00000569130 274 ntBASIC17.76■□□□□ 0.43
CDCA5Q96FF9 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms