Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 USP32P1-208ENST00000506594 1164 ntBASIC15.31■□□□□ 0.04
SCAMP4Q969E2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 BX539320.1-201ENST00000623759 877 ntBASIC15.31■□□□□ 0.04
SCAMP4Q969E2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCAMP4Q969E2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 AC004066.1-201ENST00000502488 802 ntBASIC15.3■□□□□ 0.04
SCAMP4Q969E2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 SLC25A47P1-201ENST00000531577 414 ntBASIC15.3■□□□□ 0.04
SCAMP4Q969E2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 PTP4A1P2-201ENST00000546033 454 ntBASIC15.3■□□□□ 0.04
SCAMP4Q969E2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 AC009486.1-201ENST00000569860 813 ntBASIC15.3■□□□□ 0.04
SCAMP4Q969E2 SAMD11P1-201ENST00000571429 661 ntBASIC15.3■□□□□ 0.04
SCAMP4Q969E2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 AC015936.2-201ENST00000593177 259 ntBASIC15.3■□□□□ 0.04
SCAMP4Q969E2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 AC093525.8-201ENST00000624099 1342 ntBASIC15.3■□□□□ 0.04
SCAMP4Q969E2 AL645728.2-202ENST00000641679 227 ntBASIC15.3■□□□□ 0.04
SCAMP4Q969E2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 LINC00554-201ENST00000564841 3011 ntBASIC15.3■□□□□ 0.04
SCAMP4Q969E2 AL162727.3-201ENST00000635661 2787 ntBASIC15.3■□□□□ 0.04
SCAMP4Q969E2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCAMP4Q969E2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms