Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CT55Q8WUE5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CT55Q8WUE5 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 IGHJ2P-201ENST00000454480 60 ntBASIC14.29□□□□□ -0.12
CT55Q8WUE5 AKR7A2P1-201ENST00000460134 915 ntBASIC14.29□□□□□ -0.12
CT55Q8WUE5 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CT55Q8WUE5 AL391280.1-201ENST00000506969 1062 ntBASIC14.29□□□□□ -0.12
CT55Q8WUE5 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 SCARNA20.5-201ENST00000516991 142 ntBASIC14.29□□□□□ -0.12
CT55Q8WUE5 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 AC020914.3-201ENST00000594712 304 ntBASIC14.29□□□□□ -0.12
CT55Q8WUE5 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 AC073413.1-201ENST00000603927 732 ntBASIC14.29□□□□□ -0.12
CT55Q8WUE5 AC244157.2-201ENST00000616239 1006 ntBASIC14.29□□□□□ -0.12
CT55Q8WUE5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CT55Q8WUE5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CT55Q8WUE5 CICP13-201ENST00000422015 2789 ntBASIC14.29□□□□□ -0.12
CT55Q8WUE5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CT55Q8WUE5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CT55Q8WUE5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CT55Q8WUE5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CT55Q8WUE5 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 AC055811.4-201ENST00000624039 1754 ntBASIC14.29□□□□□ -0.12
CT55Q8WUE5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CT55Q8WUE5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CT55Q8WUE5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CT55Q8WUE5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CT55Q8WUE5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 TNRC18P3-201ENST00000441896 2691 ntBASIC14.28□□□□□ -0.12
CT55Q8WUE5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 SLC25A24P2-201ENST00000415059 510 ntBASIC14.28□□□□□ -0.12
CT55Q8WUE5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 FNTAP2-201ENST00000430308 634 ntBASIC14.28□□□□□ -0.12
CT55Q8WUE5 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 POM121L10P-201ENST00000436994 1285 ntBASIC14.28□□□□□ -0.12
CT55Q8WUE5 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 ACTG1P17-201ENST00000558391 1119 ntBASIC14.28□□□□□ -0.12
CT55Q8WUE5 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 AC099398.1-201ENST00000567919 2776 ntBASIC14.28□□□□□ -0.12
CT55Q8WUE5 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.28□□□□□ -0.12
CT55Q8WUE5 AC138028.6-201ENST00000616106 1482 ntBASIC14.28□□□□□ -0.12
CT55Q8WUE5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CT55Q8WUE5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
CT55Q8WUE5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.27□□□□□ -0.12
CT55Q8WUE5 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.27□□□□□ -0.12
CT55Q8WUE5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.27□□□□□ -0.12
CT55Q8WUE5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CT55Q8WUE5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CT55Q8WUE5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CT55Q8WUE5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CT55Q8WUE5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CT55Q8WUE5 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CT55Q8WUE5 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CT55Q8WUE5 KRT8P4-201ENST00000509735 1454 ntBASIC14.27□□□□□ -0.12
CT55Q8WUE5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.27□□□□□ -0.12
CT55Q8WUE5 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CT55Q8WUE5 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CT55Q8WUE5 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms