Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.21□□□□□ -0.3
CLDND2Q8NHS1 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
CLDND2Q8NHS1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDND2Q8NHS1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDND2Q8NHS1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDND2Q8NHS1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDND2Q8NHS1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDND2Q8NHS1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.21□□□□□ -0.3
CLDND2Q8NHS1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CLDND2Q8NHS1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDND2Q8NHS1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.21□□□□□ -0.3
CLDND2Q8NHS1 LINC02447-202ENST00000501888 2146 ntBASIC13.21□□□□□ -0.3
CLDND2Q8NHS1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLDND2Q8NHS1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDND2Q8NHS1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 AC007274.1-201ENST00000439805 662 ntBASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 RN7SL399P-201ENST00000471648 279 ntBASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 AC092552.1-201ENST00000547243 906 ntBASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 AL162274.1-201ENST00000617191 1098 ntBASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 AL033527.5-201ENST00000641382 801 ntBASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDND2Q8NHS1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 AC112492.5-201ENST00000421897 457 ntBASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 AC007389.4-201ENST00000454674 793 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms