Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 FLJ38576-201ENST00000623820 2459 ntBASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 AL357373.1-201ENST00000394974 322 ntBASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL22A1Q8NFW1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 LINC02447-202ENST00000501888 2146 ntBASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 FAM90A21P-201ENST00000510875 1396 ntBASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 FAM90A15P-201ENST00000514465 1395 ntBASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 FAM90A6P-201ENST00000515148 1394 ntBASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 FAM90A16P-201ENST00000526662 1395 ntBASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 FAM90A9P-201ENST00000527940 1395 ntBASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 FAM90A5P-201ENST00000528738 1395 ntBASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 FAM90A14P-201ENST00000530386 1395 ntBASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 FAM90A13P-201ENST00000534703 1395 ntBASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 AC131206.1-201ENST00000538078 1211 ntBASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 AC140113.1-201ENST00000603467 169 ntBASIC19.91■□□□□ 0.78
COL22A1Q8NFW1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 TMBIM7P-202ENST00000641474 1516 ntBASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 AL672207.1-201ENST00000328462 1570 ntBASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms