Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 AL139010.1-201ENST00000454878 894 ntBASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 AC084121.4-201ENST00000641598 221 ntBASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 AF228730.8-201ENST00000642140 221 ntBASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 ST20-AS1-201ENST00000560255 4223 ntBASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 AL645939.2-201ENST00000427340 991 ntBASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 SPCS2P4-201ENST00000436160 681 ntBASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 MKNK2P1-201ENST00000437526 628 ntBASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 IGHV3-62-201ENST00000520057 340 ntBASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 LINC01225-203ENST00000563550 1244 ntBASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 AL450472.2-201ENST00000603663 1156 ntBASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms