Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 FNTAP2-201ENST00000430308 634 ntBASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 PRSS30P-206ENST00000641773 873 ntBASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 AC006449.6-201ENST00000612330 2296 ntBASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 AL354989.2-201ENST00000435838 1540 ntBASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 AL645937.2-201ENST00000396808 931 ntBASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 CNN2P10-201ENST00000443067 918 ntBASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 AL590640.2-201ENST00000457038 527 ntBASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 AC015967.2-201ENST00000624092 234 ntBASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 AC006435.4-201ENST00000625037 234 ntBASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 AL356737.1-201ENST00000634391 234 ntBASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 PAUPAR-201ENST00000630360 2965 ntBASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.66■□□□□ 0.1
SYNPOQ8N3V7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 AC079178.1-201ENST00000420915 656 ntBASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 AC005077.2-201ENST00000449786 690 ntBASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 AC126915.1-201ENST00000522847 1038 ntBASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms