Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLX4Q8IY92 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLX4Q8IY92 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLX4Q8IY92 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 AC239868.1-201ENST00000369385 493 ntBASIC18.36■□□□□ 0.53
SLX4Q8IY92 AC234644.1-201ENST00000406065 370 ntBASIC18.36■□□□□ 0.53
SLX4Q8IY92 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLX4Q8IY92 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 MIR4522-201ENST00000584932 87 ntBASIC18.36■□□□□ 0.53
SLX4Q8IY92 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 AC009084.3-201ENST00000623356 437 ntBASIC18.36■□□□□ 0.53
SLX4Q8IY92 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLX4Q8IY92 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLX4Q8IY92 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLX4Q8IY92 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 AC006449.5-201ENST00000610658 2098 ntBASIC18.36■□□□□ 0.53
SLX4Q8IY92 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLX4Q8IY92 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLX4Q8IY92 RPL8P2-201ENST00000430538 502 ntBASIC18.35■□□□□ 0.53
SLX4Q8IY92 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.35■□□□□ 0.53
SLX4Q8IY92 AC012441.2-201ENST00000444843 739 ntBASIC18.35■□□□□ 0.53
SLX4Q8IY92 AP000358.1-201ENST00000456260 156 ntBASIC18.35■□□□□ 0.53
SLX4Q8IY92 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC18.35■□□□□ 0.53
SLX4Q8IY92 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.35■□□□□ 0.53
SLX4Q8IY92 ALG3P1-201ENST00000508806 1114 ntBASIC18.35■□□□□ 0.53
SLX4Q8IY92 AC141586.1-203ENST00000567242 366 ntBASIC18.35■□□□□ 0.53
SLX4Q8IY92 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.35■□□□□ 0.53
SLX4Q8IY92 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLX4Q8IY92 AC025262.2-201ENST00000623975 1056 ntBASIC18.35■□□□□ 0.53
SLX4Q8IY92 AL360270.3-201ENST00000609118 1348 ntBASIC18.35■□□□□ 0.53
SLX4Q8IY92 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLX4Q8IY92 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLX4Q8IY92 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLX4Q8IY92 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLX4Q8IY92 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SLX4Q8IY92 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SLX4Q8IY92 PCDH8P1-201ENST00000428983 2773 ntBASIC18.35■□□□□ 0.53
SLX4Q8IY92 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.35■□□□□ 0.53
SLX4Q8IY92 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLX4Q8IY92 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLX4Q8IY92 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLX4Q8IY92 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLX4Q8IY92 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.35■□□□□ 0.53
SLX4Q8IY92 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLX4Q8IY92 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SLX4Q8IY92 AL645933.1-201ENST00000440087 609 ntBASIC18.35■□□□□ 0.53
SLX4Q8IY92 AC079112.1-201ENST00000454972 939 ntBASIC18.35■□□□□ 0.53
SLX4Q8IY92 RPL18AP3-201ENST00000462885 528 ntBASIC18.35■□□□□ 0.53
SLX4Q8IY92 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.35■□□□□ 0.53
SLX4Q8IY92 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.35■□□□□ 0.53
SLX4Q8IY92 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.35■□□□□ 0.53
SLX4Q8IY92 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLX4Q8IY92 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
SLX4Q8IY92 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLX4Q8IY92 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLX4Q8IY92 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLX4Q8IY92 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLX4Q8IY92 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.34■□□□□ 0.53
SLX4Q8IY92 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SLX4Q8IY92 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.34■□□□□ 0.53
SLX4Q8IY92 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.34■□□□□ 0.53
SLX4Q8IY92 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLX4Q8IY92 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SLX4Q8IY92 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLX4Q8IY92 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLX4Q8IY92 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SLX4Q8IY92 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLX4Q8IY92 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLX4Q8IY92 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.34■□□□□ 0.53
SLX4Q8IY92 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLX4Q8IY92 AC008723.1-201ENST00000506922 207 ntBASIC18.34■□□□□ 0.53
SLX4Q8IY92 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SLX4Q8IY92 PHBP15-201ENST00000574228 665 ntBASIC18.34■□□□□ 0.53
SLX4Q8IY92 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLX4Q8IY92 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLX4Q8IY92 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLX4Q8IY92 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLX4Q8IY92 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLX4Q8IY92 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SLX4Q8IY92 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLX4Q8IY92 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLX4Q8IY92 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLX4Q8IY92 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLX4Q8IY92 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SLX4Q8IY92 FRMPD2B-201ENST00000431305 1347 ntBASIC18.33■□□□□ 0.53
SLX4Q8IY92 CICP11-201ENST00000434745 2827 ntBASIC18.33■□□□□ 0.53
SLX4Q8IY92 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms