Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTTNQ86VV8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTTNQ86VV8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTTNQ86VV8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTTNQ86VV8 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.73□□□□□ -0.21
RTTNQ86VV8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTTNQ86VV8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTTNQ86VV8 AL035456.1-201ENST00000456064 1369 ntBASIC13.73□□□□□ -0.21
RTTNQ86VV8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTTNQ86VV8 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.73□□□□□ -0.21
RTTNQ86VV8 ZNF890P-202ENST00000530367 1156 ntBASIC13.73□□□□□ -0.21
RTTNQ86VV8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 AC008738.7-201ENST00000609744 511 ntBASIC13.73□□□□□ -0.21
RTTNQ86VV8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTTNQ86VV8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTTNQ86VV8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTTNQ86VV8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTTNQ86VV8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTTNQ86VV8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.73□□□□□ -0.21
RTTNQ86VV8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTTNQ86VV8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 FO393414.2-201ENST00000405153 598 ntBASIC13.72□□□□□ -0.21
RTTNQ86VV8 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 RN7SL618P-201ENST00000477850 296 ntBASIC13.72□□□□□ -0.21
RTTNQ86VV8 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 AC104794.3-201ENST00000566840 1248 ntBASIC13.72□□□□□ -0.21
RTTNQ86VV8 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 AL109936.8-201ENST00000641772 604 ntBASIC13.72□□□□□ -0.21
RTTNQ86VV8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 FLJ16779-201ENST00000612722 7638 ntBASIC13.72□□□□□ -0.21
RTTNQ86VV8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.72□□□□□ -0.21
RTTNQ86VV8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.72□□□□□ -0.21
RTTNQ86VV8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 AC025048.3-201ENST00000590609 569 ntBASIC13.72□□□□□ -0.21
RTTNQ86VV8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 AC004233.3-201ENST00000607794 1269 ntBASIC13.72□□□□□ -0.21
RTTNQ86VV8 AC005702.4-201ENST00000618393 416 ntBASIC13.72□□□□□ -0.21
RTTNQ86VV8 MIR6069-201ENST00000620069 79 ntBASIC13.72□□□□□ -0.21
RTTNQ86VV8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.72□□□□□ -0.21
RTTNQ86VV8 AC011270.2-201ENST00000624293 2550 ntBASIC13.72□□□□□ -0.21
RTTNQ86VV8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTTNQ86VV8 CICP11-201ENST00000434745 2827 ntBASIC13.71□□□□□ -0.21
RTTNQ86VV8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms