Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 AL022342.1-201ENST00000400363 863 ntBASIC15.62■□□□□ 0.09
RAPH1Q70E73 AC136604.1-201ENST00000418535 575 ntBASIC15.62■□□□□ 0.09
RAPH1Q70E73 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 ALG1L8P-201ENST00000533887 760 ntBASIC15.62■□□□□ 0.09
RAPH1Q70E73 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 AC105021.1-202ENST00000570572 669 ntBASIC15.62■□□□□ 0.09
RAPH1Q70E73 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 AC003101.2-201ENST00000612557 442 ntBASIC15.62■□□□□ 0.09
RAPH1Q70E73 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 LINC01101-201ENST00000622953 1884 ntBASIC15.62■□□□□ 0.09
RAPH1Q70E73 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RAPH1Q70E73 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 AC005829.1-201ENST00000570002 483 ntBASIC15.61■□□□□ 0.09
RAPH1Q70E73 AC022145.2-201ENST00000598203 171 ntBASIC15.61■□□□□ 0.09
RAPH1Q70E73 AC018529.1-201ENST00000613063 361 ntBASIC15.61■□□□□ 0.09
RAPH1Q70E73 AC105339.1-204ENST00000636249 355 ntBASIC15.61■□□□□ 0.09
RAPH1Q70E73 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.61■□□□□ 0.09
RAPH1Q70E73 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAPH1Q70E73 AC005840.4-201ENST00000541242 2494 ntBASIC15.6■□□□□ 0.09
RAPH1Q70E73 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.6■□□□□ 0.09
RAPH1Q70E73 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms