Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 AC023274.1-201ENST00000418278 595 ntBASIC13.62□□□□□ -0.23
C11orf88Q6PI97 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 AC096734.2-201ENST00000562054 433 ntBASIC13.62□□□□□ -0.23
C11orf88Q6PI97 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 AC134684.3-201ENST00000641758 218 ntBASIC13.62□□□□□ -0.23
C11orf88Q6PI97 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C11orf88Q6PI97 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 AC254562.1-201ENST00000417586 456 ntBASIC13.61□□□□□ -0.23
C11orf88Q6PI97 PAWRP1-201ENST00000451083 565 ntBASIC13.61□□□□□ -0.23
C11orf88Q6PI97 YBX1P5-201ENST00000509441 847 ntBASIC13.61□□□□□ -0.23
C11orf88Q6PI97 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 CYP2A7P1-201ENST00000595391 815 ntBASIC13.61□□□□□ -0.23
C11orf88Q6PI97 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.61□□□□□ -0.23
C11orf88Q6PI97 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms