Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 AC092865.5-201ENST00000545435 363 ntBASIC15.85■□□□□ 0.13
CASC4Q6P4E1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 AC099063.4-201ENST00000641099 1602 ntBASIC15.85■□□□□ 0.13
CASC4Q6P4E1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 KRT8P12-202ENST00000472924 1397 ntBASIC15.85■□□□□ 0.13
CASC4Q6P4E1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 CICP11-201ENST00000434745 2827 ntBASIC15.84■□□□□ 0.13
CASC4Q6P4E1 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 TARDBPP1-201ENST00000442013 1203 ntBASIC15.84■□□□□ 0.13
CASC4Q6P4E1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 AL589739.1-201ENST00000607720 493 ntBASIC15.84■□□□□ 0.13
CASC4Q6P4E1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 AL136379.1-201ENST00000623471 2642 ntBASIC15.84■□□□□ 0.13
CASC4Q6P4E1 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASC4Q6P4E1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CASC4Q6P4E1 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CASC4Q6P4E1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.83■□□□□ 0.13
CASC4Q6P4E1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
CASC4Q6P4E1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CASC4Q6P4E1 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CASC4Q6P4E1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.83■□□□□ 0.13
CASC4Q6P4E1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CASC4Q6P4E1 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms