Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.11■□□□□ 0.65
RC3H1Q5TC82 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 AL355334.1-201ENST00000417713 215 ntBASIC19.11■□□□□ 0.65
RC3H1Q5TC82 RN7SL258P-201ENST00000478664 300 ntBASIC19.11■□□□□ 0.65
RC3H1Q5TC82 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 PGAM1P5-201ENST00000548011 764 ntBASIC19.11■□□□□ 0.65
RC3H1Q5TC82 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 NAT9-211ENST00000580632 799 ntTSL 3 BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 AC008805.1-201ENST00000590892 364 ntBASIC19.11■□□□□ 0.65
RC3H1Q5TC82 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 AC087045.2-201ENST00000606279 1003 ntBASIC19.11■□□□□ 0.65
RC3H1Q5TC82 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 MBLAC2-202ENST00000514906 1936 ntBASIC19.11■□□□□ 0.65
RC3H1Q5TC82 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RC3H1Q5TC82 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 SCARNA21-201ENST00000517026 139 ntBASIC19.1■□□□□ 0.65
RC3H1Q5TC82 AC092171.5-201ENST00000608012 942 ntBASIC19.1■□□□□ 0.65
RC3H1Q5TC82 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RC3H1Q5TC82 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 AC020910.5-201ENST00000623668 1865 ntBASIC19.09■□□□□ 0.65
RC3H1Q5TC82 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 AL603832.2-201ENST00000566195 2125 ntBASIC19.09■□□□□ 0.65
RC3H1Q5TC82 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 AC006058.4-201ENST00000624016 1670 ntBASIC19.09■□□□□ 0.65
RC3H1Q5TC82 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 AL627231.1-201ENST00000394467 1125 ntBASIC19.09■□□□□ 0.65
RC3H1Q5TC82 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 LBH-202ENST00000401506 485 ntTSL 3 BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 AC103810.10-201ENST00000606504 343 ntBASIC19.09■□□□□ 0.65
RC3H1Q5TC82 AL805961.1-201ENST00000642026 753 ntBASIC19.09■□□□□ 0.65
RC3H1Q5TC82 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RC3H1Q5TC82 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RC3H1Q5TC82 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RC3H1Q5TC82 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RC3H1Q5TC82 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RC3H1Q5TC82 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RC3H1Q5TC82 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms