Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 AC026691.1-201ENST00000602502 2017 ntBASIC16.35■□□□□ 0.21
VARS2Q5ST30 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 AL645937.2-201ENST00000396808 931 ntBASIC16.34■□□□□ 0.21
VARS2Q5ST30 AL139094.1-201ENST00000405549 1188 ntBASIC16.34■□□□□ 0.21
VARS2Q5ST30 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 RNA5SP486-201ENST00000515961 83 ntBASIC16.34■□□□□ 0.21
VARS2Q5ST30 DUX4L45-201ENST00000566406 1057 ntBASIC16.34■□□□□ 0.21
VARS2Q5ST30 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 AC021321.1-201ENST00000607397 1113 ntBASIC16.34■□□□□ 0.21
VARS2Q5ST30 AC006213.5-201ENST00000619673 288 ntBASIC16.34■□□□□ 0.21
VARS2Q5ST30 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 AL645728.2-202ENST00000641679 227 ntBASIC16.34■□□□□ 0.21
VARS2Q5ST30 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.34■□□□□ 0.21
VARS2Q5ST30 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARS2Q5ST30 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.33■□□□□ 0.21
VARS2Q5ST30 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VARS2Q5ST30 PCDHA1-201ENST00000378133 2726 ntBASIC16.33■□□□□ 0.21
VARS2Q5ST30 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
VARS2Q5ST30 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
VARS2Q5ST30 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
VARS2Q5ST30 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
VARS2Q5ST30 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 AC007919.2-201ENST00000444110 511 ntBASIC16.33■□□□□ 0.2
VARS2Q5ST30 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 SAMD11P1-201ENST00000571429 661 ntBASIC16.33■□□□□ 0.2
VARS2Q5ST30 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 LRRC59-203ENST00000576448 1531 ntBASIC16.33■□□□□ 0.2
VARS2Q5ST30 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARS2Q5ST30 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.33■□□□□ 0.2
VARS2Q5ST30 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms