Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.53■□□□□ 0.56
RFX7Q2KHR2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.53■□□□□ 0.56
RFX7Q2KHR2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.53■□□□□ 0.56
RFX7Q2KHR2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.53■□□□□ 0.56
RFX7Q2KHR2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.53■□□□□ 0.56
RFX7Q2KHR2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.53■□□□□ 0.56
RFX7Q2KHR2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RFX7Q2KHR2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX7Q2KHR2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.53■□□□□ 0.56
RFX7Q2KHR2 RHOXF1P1-202ENST00000635473 501 ntBASIC18.53■□□□□ 0.56
RFX7Q2KHR2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.53■□□□□ 0.56
RFX7Q2KHR2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFX7Q2KHR2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX7Q2KHR2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFX7Q2KHR2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX7Q2KHR2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RFX7Q2KHR2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.52■□□□□ 0.55
RFX7Q2KHR2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.52■□□□□ 0.55
RFX7Q2KHR2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 NUS1P3-201ENST00000423502 862 ntBASIC18.52■□□□□ 0.55
RFX7Q2KHR2 AC016694.1-201ENST00000434179 700 ntBASIC18.52■□□□□ 0.55
RFX7Q2KHR2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 AC009542.2-202ENST00000619004 1067 ntBASIC18.52■□□□□ 0.55
RFX7Q2KHR2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 REXO1L2P-201ENST00000425429 2069 ntBASIC18.52■□□□□ 0.55
RFX7Q2KHR2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 TCAF2P1-201ENST00000291129 2421 ntBASIC18.52■□□□□ 0.55
RFX7Q2KHR2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 AL158070.2-201ENST00000623713 1621 ntBASIC18.52■□□□□ 0.55
RFX7Q2KHR2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFX7Q2KHR2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 AC091951.1-201ENST00000512854 2465 ntBASIC18.51■□□□□ 0.55
RFX7Q2KHR2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 KRT8P14-201ENST00000414254 1442 ntBASIC18.51■□□□□ 0.55
RFX7Q2KHR2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 AP001582.1-201ENST00000525856 295 ntBASIC18.51■□□□□ 0.55
RFX7Q2KHR2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 DUX4L45-201ENST00000566406 1057 ntBASIC18.51■□□□□ 0.55
RFX7Q2KHR2 MIR6869-201ENST00000619434 62 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms