Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 MCCD1P2-201ENST00000423228 335 ntBASIC14.72□□□□□ -0.05
CHRNB3Q05901 HCG4B-203ENST00000450128 991 ntBASIC14.72□□□□□ -0.05
CHRNB3Q05901 PHKG1P2-201ENST00000457537 863 ntBASIC14.72□□□□□ -0.05
CHRNB3Q05901 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 RPL5P21-201ENST00000404620 815 ntBASIC14.71□□□□□ -0.05
CHRNB3Q05901 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 IGLL3P-201ENST00000412472 434 ntBASIC14.71□□□□□ -0.05
CHRNB3Q05901 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.71□□□□□ -0.05
CHRNB3Q05901 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 AC096734.2-201ENST00000562054 433 ntBASIC14.71□□□□□ -0.05
CHRNB3Q05901 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 AC005829.1-201ENST00000570002 483 ntBASIC14.71□□□□□ -0.05
CHRNB3Q05901 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 AC023141.13-201ENST00000604991 943 ntBASIC14.71□□□□□ -0.05
CHRNB3Q05901 AL161645.1-201ENST00000622716 1255 ntBASIC14.71□□□□□ -0.05
CHRNB3Q05901 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB3Q05901 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNB3Q05901 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNB3Q05901 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.71□□□□□ -0.06
CHRNB3Q05901 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.71□□□□□ -0.06
CHRNB3Q05901 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNB3Q05901 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
CHRNB3Q05901 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.71□□□□□ -0.06
CHRNB3Q05901 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.06
CHRNB3Q05901 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB3Q05901 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms