Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP1Q04837 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SSBP1Q04837 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP1Q04837 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SSBP1Q04837 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP1Q04837 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.11□□□□□ -0.31
SSBP1Q04837 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.11□□□□□ -0.31
SSBP1Q04837 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
SSBP1Q04837 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SSBP1Q04837 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SSBP1Q04837 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
SSBP1Q04837 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
SSBP1Q04837 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.11□□□□□ -0.31
SSBP1Q04837 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.11□□□□□ -0.31
SSBP1Q04837 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.11□□□□□ -0.31
SSBP1Q04837 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
SSBP1Q04837 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP1Q04837 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.11□□□□□ -0.31
SSBP1Q04837 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.11□□□□□ -0.31
SSBP1Q04837 TCAF1P1-201ENST00000414990 2232 ntBASIC13.11□□□□□ -0.31
SSBP1Q04837 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP1Q04837 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP1Q04837 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SSBP1Q04837 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.1□□□□□ -0.31
SSBP1Q04837 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SSBP1Q04837 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SSBP1Q04837 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 FOXO1B-201ENST00000504678 1527 ntBASIC13.1□□□□□ -0.31
SSBP1Q04837 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SSBP1Q04837 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
SSBP1Q04837 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SSBP1Q04837 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
SSBP1Q04837 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.1□□□□□ -0.31
SSBP1Q04837 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.1□□□□□ -0.31
SSBP1Q04837 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.1□□□□□ -0.31
SSBP1Q04837 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.1□□□□□ -0.31
SSBP1Q04837 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.1□□□□□ -0.31
SSBP1Q04837 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 AC117500.6-201ENST00000624871 588 ntBASIC13.1□□□□□ -0.31
SSBP1Q04837 AC010507.1-201ENST00000633895 436 ntBASIC13.1□□□□□ -0.31
SSBP1Q04837 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.1□□□□□ -0.31
SSBP1Q04837 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.1□□□□□ -0.31
SSBP1Q04837 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP1Q04837 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SSBP1Q04837 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP1Q04837 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.09□□□□□ -0.31
SSBP1Q04837 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.09□□□□□ -0.31
SSBP1Q04837 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP1Q04837 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP1Q04837 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.09□□□□□ -0.31
SSBP1Q04837 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP1Q04837 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP1Q04837 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP1Q04837 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.09□□□□□ -0.31
SSBP1Q04837 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP1Q04837 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.09□□□□□ -0.31
SSBP1Q04837 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP1Q04837 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
SSBP1Q04837 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms