Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKL1Q00532 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.27■□□□□ 0.03
CDKL1Q00532 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKL1Q00532 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKL1Q00532 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDKL1Q00532 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CDKL1Q00532 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKL1Q00532 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.26■□□□□ 0.03
CDKL1Q00532 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKL1Q00532 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDKL1Q00532 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
CDKL1Q00532 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDKL1Q00532 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.26■□□□□ 0.03
CDKL1Q00532 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDKL1Q00532 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.26■□□□□ 0.03
CDKL1Q00532 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.26■□□□□ 0.03
CDKL1Q00532 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.26■□□□□ 0.03
CDKL1Q00532 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKL1Q00532 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.26■□□□□ 0.03
CDKL1Q00532 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDKL1Q00532 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKL1Q00532 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.26■□□□□ 0.03
CDKL1Q00532 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.26■□□□□ 0.03
CDKL1Q00532 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDKL1Q00532 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKL1Q00532 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.26■□□□□ 0.03
CDKL1Q00532 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKL1Q00532 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 CICP14-201ENST00000629111 2732 ntBASIC15.26■□□□□ 0.03
CDKL1Q00532 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKL1Q00532 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL1Q00532 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKL1Q00532 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL1Q00532 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL1Q00532 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL1Q00532 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL1Q00532 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
CDKL1Q00532 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.25■□□□□ 0.03
CDKL1Q00532 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL1Q00532 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL1Q00532 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL1Q00532 KRT18P28-201ENST00000453838 1332 ntBASIC15.25■□□□□ 0.03
CDKL1Q00532 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL1Q00532 AC041040.2-201ENST00000622926 2899 ntBASIC15.25■□□□□ 0.03
CDKL1Q00532 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.25■□□□□ 0.03
CDKL1Q00532 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL1Q00532 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL1Q00532 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL1Q00532 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL1Q00532 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL1Q00532 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL1Q00532 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.25■□□□□ 0.03
CDKL1Q00532 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.25■□□□□ 0.03
CDKL1Q00532 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL1Q00532 AC097493.3-201ENST00000509725 367 ntBASIC15.25■□□□□ 0.03
CDKL1Q00532 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.25■□□□□ 0.03
CDKL1Q00532 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.25■□□□□ 0.03
CDKL1Q00532 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL1Q00532 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.25■□□□□ 0.03
CDKL1Q00532 AL844908.2-201ENST00000609461 460 ntBASIC15.25■□□□□ 0.03
CDKL1Q00532 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL1Q00532 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL1Q00532 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDKL1Q00532 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.25■□□□□ 0.03
CDKL1Q00532 AC013726.1-201ENST00000563747 2285 ntBASIC15.25■□□□□ 0.03
CDKL1Q00532 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDKL1Q00532 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CDKL1Q00532 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL1Q00532 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL1Q00532 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL1Q00532 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CDKL1Q00532 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms