Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEP78395 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 KRT8P44-201ENST00000441609 1350 ntBASIC15.67■□□□□ 0.1
PRAMEP78395 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEP78395 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PRAMEP78395 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEP78395 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 MIR943-201ENST00000401286 94 ntBASIC15.67■□□□□ 0.1
PRAMEP78395 RPL5P21-201ENST00000404620 815 ntBASIC15.67■□□□□ 0.1
PRAMEP78395 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.67■□□□□ 0.1
PRAMEP78395 SDHAP3-202ENST00000515467 728 ntBASIC15.67■□□□□ 0.1
PRAMEP78395 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEP78395 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.67■□□□□ 0.1
PRAMEP78395 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.67■□□□□ 0.1
PRAMEP78395 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEP78395 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PRAMEP78395 AL109936.8-201ENST00000641772 604 ntBASIC15.67■□□□□ 0.1
PRAMEP78395 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PRAMEP78395 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEP78395 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEP78395 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEP78395 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEP78395 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 AC087499.5-201ENST00000452760 1342 ntBASIC15.67■□□□□ 0.1
PRAMEP78395 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEP78395 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.66■□□□□ 0.1
PRAMEP78395 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.66■□□□□ 0.1
PRAMEP78395 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
PRAMEP78395 AC084364.1-201ENST00000551967 1556 ntBASIC15.66■□□□□ 0.1
PRAMEP78395 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEP78395 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.66■□□□□ 0.1
PRAMEP78395 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEP78395 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEP78395 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
PRAMEP78395 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.66■□□□□ 0.1
PRAMEP78395 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.66■□□□□ 0.1
PRAMEP78395 AC092580.3-201ENST00000430932 139 ntBASIC15.66■□□□□ 0.1
PRAMEP78395 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 AC097493.3-201ENST00000509725 367 ntBASIC15.66■□□□□ 0.1
PRAMEP78395 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.66■□□□□ 0.1
PRAMEP78395 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.66■□□□□ 0.1
PRAMEP78395 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.66■□□□□ 0.1
PRAMEP78395 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.66■□□□□ 0.1
PRAMEP78395 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.66■□□□□ 0.1
PRAMEP78395 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEP78395 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEP78395 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PRAMEP78395 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEP78395 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEP78395 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEP78395 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PRAMEP78395 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEP78395 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PRAMEP78395 AC015922.1-201ENST00000421102 1152 ntBASIC15.65■□□□□ 0.1
PRAMEP78395 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.65■□□□□ 0.1
PRAMEP78395 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
PRAMEP78395 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.65■□□□□ 0.1
PRAMEP78395 AF228730.6-201ENST00000641497 218 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms