Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.68□□□□□ -0.38
SPCS3P61009 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SPCS3P61009 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.68□□□□□ -0.38
SPCS3P61009 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.68□□□□□ -0.38
SPCS3P61009 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SPCS3P61009 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
SPCS3P61009 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SPCS3P61009 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.68□□□□□ -0.38
SPCS3P61009 FAM220BP-201ENST00000377689 816 ntBASIC12.68□□□□□ -0.38
SPCS3P61009 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.68□□□□□ -0.38
SPCS3P61009 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.68□□□□□ -0.38
SPCS3P61009 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.68□□□□□ -0.38
SPCS3P61009 RNA5SP419-201ENST00000515908 135 ntBASIC12.68□□□□□ -0.38
SPCS3P61009 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SPCS3P61009 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.68□□□□□ -0.38
SPCS3P61009 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.68□□□□□ -0.38
SPCS3P61009 AC027307.2-201ENST00000591252 911 ntBASIC12.68□□□□□ -0.38
SPCS3P61009 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.68□□□□□ -0.38
SPCS3P61009 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.68□□□□□ -0.38
SPCS3P61009 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.68□□□□□ -0.38
SPCS3P61009 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.68□□□□□ -0.38
SPCS3P61009 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.68□□□□□ -0.38
SPCS3P61009 AC026979.3-201ENST00000607315 403 ntBASIC12.68□□□□□ -0.38
SPCS3P61009 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SPCS3P61009 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SPCS3P61009 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SPCS3P61009 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.68□□□□□ -0.38
SPCS3P61009 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 AP000845.1-201ENST00000581677 2131 ntBASIC12.68□□□□□ -0.38
SPCS3P61009 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 HSPA7-201ENST00000445535 1927 ntBASIC12.68□□□□□ -0.38
SPCS3P61009 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.68□□□□□ -0.38
SPCS3P61009 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SPCS3P61009 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SPCS3P61009 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 AL136982.4-201ENST00000437689 1740 ntBASIC12.68□□□□□ -0.38
SPCS3P61009 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.67□□□□□ -0.38
SPCS3P61009 AL390755.1-201ENST00000623716 2027 ntBASIC12.67□□□□□ -0.38
SPCS3P61009 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SPCS3P61009 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SPCS3P61009 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SPCS3P61009 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SPCS3P61009 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.67□□□□□ -0.38
SPCS3P61009 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SPCS3P61009 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.67□□□□□ -0.38
SPCS3P61009 EEF1DP4-201ENST00000446006 880 ntBASIC12.67□□□□□ -0.38
SPCS3P61009 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.67□□□□□ -0.38
SPCS3P61009 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.67□□□□□ -0.38
SPCS3P61009 AC145285.3-201ENST00000564603 959 ntBASIC12.67□□□□□ -0.38
SPCS3P61009 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SPCS3P61009 AC099522.2-201ENST00000607001 744 ntBASIC12.67□□□□□ -0.38
SPCS3P61009 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SPCS3P61009 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
SPCS3P61009 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.67□□□□□ -0.38
SPCS3P61009 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.67□□□□□ -0.38
SPCS3P61009 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SPCS3P61009 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SPCS3P61009 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SPCS3P61009 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SPCS3P61009 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SPCS3P61009 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms