Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PER3P56645 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PER3P56645 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PER3P56645 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PER3P56645 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PER3P56645 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PER3P56645 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PER3P56645 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PER3P56645 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PER3P56645 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PER3P56645 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PER3P56645 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.41□□□□□ -0.1
PER3P56645 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.41□□□□□ -0.1
PER3P56645 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PER3P56645 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 NORAD-201ENST00000565493 5339 ntBASIC14.41□□□□□ -0.1
PER3P56645 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PER3P56645 BRWD1P1-201ENST00000401091 371 ntBASIC14.41□□□□□ -0.1
PER3P56645 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.41□□□□□ -0.1
PER3P56645 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.41□□□□□ -0.1
PER3P56645 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.41□□□□□ -0.1
PER3P56645 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.41□□□□□ -0.1
PER3P56645 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.41□□□□□ -0.1
PER3P56645 AC008735.3-201ENST00000596646 500 ntBASIC14.41□□□□□ -0.1
PER3P56645 WFDC1-204ENST00000613603 549 ntBASIC14.41□□□□□ -0.1
PER3P56645 MIR8072-201ENST00000614241 80 ntBASIC14.41□□□□□ -0.1
PER3P56645 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.41□□□□□ -0.1
PER3P56645 AC068587.10-201ENST00000641210 219 ntBASIC14.41□□□□□ -0.1
PER3P56645 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.41□□□□□ -0.1
PER3P56645 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.41□□□□□ -0.1
PER3P56645 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.41□□□□□ -0.1
PER3P56645 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PER3P56645 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
PER3P56645 GRK6P1-201ENST00000400595 1711 ntBASIC14.41□□□□□ -0.1
PER3P56645 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.41□□□□□ -0.1
PER3P56645 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PER3P56645 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PER3P56645 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
PER3P56645 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PER3P56645 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.4□□□□□ -0.1
PER3P56645 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PER3P56645 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.4□□□□□ -0.1
PER3P56645 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.4□□□□□ -0.1
PER3P56645 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PER3P56645 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.4□□□□□ -0.1
PER3P56645 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PER3P56645 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PER3P56645 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.4□□□□□ -0.1
PER3P56645 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms