Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH15P55291 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH15P55291 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH15P55291 AC107918.2-201ENST00000530817 355 ntBASIC14.53□□□□□ -0.08
CDH15P55291 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH15P55291 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH15P55291 AC064836.3-201ENST00000607928 673 ntBASIC14.53□□□□□ -0.08
CDH15P55291 AC004706.3-202ENST00000621574 984 ntBASIC14.53□□□□□ -0.08
CDH15P55291 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH15P55291 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH15P55291 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH15P55291 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH15P55291 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH15P55291 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDH15P55291 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH15P55291 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH15P55291 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH15P55291 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH15P55291 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDH15P55291 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.53□□□□□ -0.08
CDH15P55291 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH15P55291 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH15P55291 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH15P55291 AP001267.2-201ENST00000532619 2086 ntBASIC14.53□□□□□ -0.08
CDH15P55291 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDH15P55291 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH15P55291 Z82170.1-201ENST00000625081 3192 ntBASIC14.53□□□□□ -0.08
CDH15P55291 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH15P55291 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CDH15P55291 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.52□□□□□ -0.08
CDH15P55291 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CDH15P55291 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH15P55291 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH15P55291 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH15P55291 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH15P55291 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH15P55291 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH15P55291 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH15P55291 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH15P55291 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CDH15P55291 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
CDH15P55291 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CDH15P55291 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH15P55291 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH15P55291 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDH15P55291 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH15P55291 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
CDH15P55291 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH15P55291 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH15P55291 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CDH15P55291 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH15P55291 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH15P55291 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH15P55291 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH15P55291 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH15P55291 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.52□□□□□ -0.09
CDH15P55291 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.52□□□□□ -0.09
CDH15P55291 AC079781.4-201ENST00000641908 219 ntBASIC14.52□□□□□ -0.09
CDH15P55291 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH15P55291 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH15P55291 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
CDH15P55291 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
CDH15P55291 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH15P55291 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH15P55291 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH15P55291 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDH15P55291 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH15P55291 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH15P55291 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH15P55291 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH15P55291 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH15P55291 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH15P55291 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH15P55291 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH15P55291 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH15P55291 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH15P55291 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH15P55291 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH15P55291 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH15P55291 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH15P55291 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH15P55291 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH15P55291 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH15P55291 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH15P55291 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH15P55291 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH15P55291 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH15P55291 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH15P55291 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CDH15P55291 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH15P55291 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH15P55291 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH15P55291 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH15P55291 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH15P55291 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH15P55291 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH15P55291 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH15P55291 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH15P55291 AC112482.1-201ENST00000492080 688 ntBASIC14.51□□□□□ -0.09
CDH15P55291 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms