Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 BX842568.4-201ENST00000421222 227 ntBASIC15.91■□□□□ 0.14
ITGA8P53708 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.91■□□□□ 0.14
ITGA8P53708 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.91■□□□□ 0.14
ITGA8P53708 PGAM5P1-201ENST00000518923 814 ntBASIC15.91■□□□□ 0.14
ITGA8P53708 ALG1L8P-201ENST00000533887 760 ntBASIC15.91■□□□□ 0.14
ITGA8P53708 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.91■□□□□ 0.14
ITGA8P53708 AC040169.1-201ENST00000565382 521 ntBASIC15.91■□□□□ 0.14
ITGA8P53708 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITGA8P53708 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.91■□□□□ 0.14
ITGA8P53708 GPALPP1-207ENST00000611650 899 ntBASIC15.91■□□□□ 0.14
ITGA8P53708 C20orf181-201ENST00000623918 480 ntBASIC15.91■□□□□ 0.14
ITGA8P53708 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ITGA8P53708 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITGA8P53708 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITGA8P53708 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITGA8P53708 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITGA8P53708 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ITGA8P53708 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.91■□□□□ 0.14
ITGA8P53708 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ITGA8P53708 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ITGA8P53708 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ITGA8P53708 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITGA8P53708 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITGA8P53708 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITGA8P53708 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.91■□□□□ 0.14
ITGA8P53708 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.91■□□□□ 0.14
ITGA8P53708 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.9■□□□□ 0.14
ITGA8P53708 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
ITGA8P53708 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.9■□□□□ 0.14
ITGA8P53708 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
ITGA8P53708 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ITGA8P53708 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.9■□□□□ 0.14
ITGA8P53708 MIR600HG-201ENST00000449175 5984 ntBASIC15.9■□□□□ 0.14
ITGA8P53708 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
ITGA8P53708 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
ITGA8P53708 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ITGA8P53708 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
ITGA8P53708 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
ITGA8P53708 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.9■□□□□ 0.14
ITGA8P53708 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.9■□□□□ 0.14
ITGA8P53708 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.9■□□□□ 0.14
ITGA8P53708 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.9■□□□□ 0.14
ITGA8P53708 AC006538.3-201ENST00000612495 578 ntBASIC15.9■□□□□ 0.14
ITGA8P53708 AC018529.1-201ENST00000613063 361 ntBASIC15.9■□□□□ 0.14
ITGA8P53708 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ITGA8P53708 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.9■□□□□ 0.14
ITGA8P53708 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.9■□□□□ 0.14
ITGA8P53708 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ITGA8P53708 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ITGA8P53708 AC015656.1-201ENST00000624209 3578 ntBASIC15.9■□□□□ 0.14
ITGA8P53708 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ITGA8P53708 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.89■□□□□ 0.13
ITGA8P53708 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.89■□□□□ 0.13
ITGA8P53708 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
ITGA8P53708 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ITGA8P53708 AC018529.2-202ENST00000611482 3087 ntBASIC15.89■□□□□ 0.13
ITGA8P53708 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ITGA8P53708 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ITGA8P53708 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ITGA8P53708 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ITGA8P53708 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ITGA8P53708 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.89■□□□□ 0.13
ITGA8P53708 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.89■□□□□ 0.13
ITGA8P53708 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ITGA8P53708 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.89■□□□□ 0.13
ITGA8P53708 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ITGA8P53708 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ITGA8P53708 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ITGA8P53708 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ITGA8P53708 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ITGA8P53708 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.89■□□□□ 0.13
ITGA8P53708 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.89■□□□□ 0.13
ITGA8P53708 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.89■□□□□ 0.13
ITGA8P53708 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.89■□□□□ 0.13
ITGA8P53708 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
ITGA8P53708 AL133215.2-201ENST00000609242 977 ntBASIC15.89■□□□□ 0.13
ITGA8P53708 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.89■□□□□ 0.13
ITGA8P53708 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ITGA8P53708 BX640514.1-201ENST00000583223 1918 ntBASIC15.89■□□□□ 0.13
ITGA8P53708 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ITGA8P53708 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.89■□□□□ 0.13
ITGA8P53708 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ITGA8P53708 OR2I1P-209ENST00000641730 5365 ntBASIC15.89■□□□□ 0.13
ITGA8P53708 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ITGA8P53708 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.89■□□□□ 0.13
ITGA8P53708 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms