Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HMGA2P52926 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HMGA2P52926 AL079307.3-201ENST00000556114 283 ntBASIC14.1□□□□□ -0.15
HMGA2P52926 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 AC003101.2-201ENST00000612557 442 ntBASIC14.1□□□□□ -0.15
HMGA2P52926 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGA2P52926 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HMGA2P52926 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HMGA2P52926 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGA2P52926 AC005840.4-201ENST00000541242 2494 ntBASIC14.1□□□□□ -0.15
HMGA2P52926 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGA2P52926 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGA2P52926 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGA2P52926 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HMGA2P52926 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGA2P52926 LILRP1-201ENST00000444199 1370 ntBASIC14.09□□□□□ -0.15
HMGA2P52926 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HMGA2P52926 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
HMGA2P52926 AC092135.3-201ENST00000624151 1846 ntBASIC14.09□□□□□ -0.15
HMGA2P52926 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HMGA2P52926 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HMGA2P52926 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HMGA2P52926 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGA2P52926 AC015922.1-201ENST00000421102 1152 ntBASIC14.09□□□□□ -0.15
HMGA2P52926 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGA2P52926 TPT1P11-201ENST00000458482 498 ntBASIC14.09□□□□□ -0.15
HMGA2P52926 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGA2P52926 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGA2P52926 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
HMGA2P52926 AC025048.3-201ENST00000590609 569 ntBASIC14.09□□□□□ -0.15
HMGA2P52926 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGA2P52926 MTDHP5-201ENST00000598980 586 ntBASIC14.09□□□□□ -0.15
HMGA2P52926 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGA2P52926 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.09□□□□□ -0.15
HMGA2P52926 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGA2P52926 AC005702.4-201ENST00000618393 416 ntBASIC14.09□□□□□ -0.15
HMGA2P52926 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HMGA2P52926 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HMGA2P52926 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 ELL2P1-201ENST00000413990 1906 ntBASIC14.09□□□□□ -0.15
HMGA2P52926 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGA2P52926 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
HMGA2P52926 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGA2P52926 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
HMGA2P52926 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HMGA2P52926 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGA2P52926 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
HMGA2P52926 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGA2P52926 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.08□□□□□ -0.15
HMGA2P52926 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGA2P52926 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGA2P52926 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGA2P52926 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
HMGA2P52926 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMGA2P52926 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HMGA2P52926 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.08□□□□□ -0.16
HMGA2P52926 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGA2P52926 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HMGA2P52926 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HMGA2P52926 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGA2P52926 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGA2P52926 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMGA2P52926 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HMGA2P52926 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms