Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.65□□□□□ -0.22
CX3CR1P49238 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CX3CR1P49238 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CX3CR1P49238 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CX3CR1P49238 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CX3CR1P49238 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CX3CR1P49238 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CX3CR1P49238 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CX3CR1P49238 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.65□□□□□ -0.22
CX3CR1P49238 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CX3CR1P49238 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CX3CR1P49238 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CX3CR1P49238 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CX3CR1P49238 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CX3CR1P49238 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CX3CR1P49238 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CX3CR1P49238 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.64□□□□□ -0.23
CX3CR1P49238 CICP24-201ENST00000605464 2705 ntBASIC13.64□□□□□ -0.23
CX3CR1P49238 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CX3CR1P49238 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CX3CR1P49238 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.64□□□□□ -0.23
CX3CR1P49238 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.64□□□□□ -0.23
CX3CR1P49238 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.64□□□□□ -0.23
CX3CR1P49238 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 RPL37AP1-201ENST00000412502 279 ntBASIC13.64□□□□□ -0.23
CX3CR1P49238 TSEN15P1-201ENST00000423257 515 ntBASIC13.64□□□□□ -0.23
CX3CR1P49238 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.64□□□□□ -0.23
CX3CR1P49238 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.64□□□□□ -0.23
CX3CR1P49238 CNN2P2-201ENST00000443536 909 ntBASIC13.64□□□□□ -0.23
CX3CR1P49238 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.64□□□□□ -0.23
CX3CR1P49238 DNAJB3-202ENST00000449667 1266 ntBASIC13.64□□□□□ -0.23
CX3CR1P49238 CNN2P3-201ENST00000450201 906 ntBASIC13.64□□□□□ -0.23
CX3CR1P49238 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.64□□□□□ -0.23
CX3CR1P49238 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.64□□□□□ -0.23
CX3CR1P49238 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.64□□□□□ -0.23
CX3CR1P49238 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CX3CR1P49238 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.64□□□□□ -0.23
CX3CR1P49238 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.64□□□□□ -0.23
CX3CR1P49238 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
CX3CR1P49238 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.64□□□□□ -0.23
CX3CR1P49238 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.64□□□□□ -0.23
CX3CR1P49238 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.64□□□□□ -0.23
CX3CR1P49238 AL136317.3-201ENST00000618497 906 ntBASIC13.64□□□□□ -0.23
CX3CR1P49238 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CX3CR1P49238 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
CX3CR1P49238 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 AC026748.1-201ENST00000624349 3251 ntBASIC13.64□□□□□ -0.23
CX3CR1P49238 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CX3CR1P49238 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CX3CR1P49238 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.64□□□□□ -0.23
CX3CR1P49238 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.64□□□□□ -0.23
CX3CR1P49238 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.64□□□□□ -0.23
CX3CR1P49238 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
CX3CR1P49238 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.64□□□□□ -0.23
CX3CR1P49238 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CX3CR1P49238 AC023908.3-201ENST00000564211 3047 ntBASIC13.64□□□□□ -0.23
CX3CR1P49238 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CX3CR1P49238 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.63□□□□□ -0.23
CX3CR1P49238 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CX3CR1P49238 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CX3CR1P49238 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CX3CR1P49238 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CX3CR1P49238 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CX3CR1P49238 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CX3CR1P49238 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CX3CR1P49238 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CX3CR1P49238 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CX3CR1P49238 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CX3CR1P49238 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CX3CR1P49238 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CX3CR1P49238 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.63□□□□□ -0.23
CX3CR1P49238 FO538757.1-201ENST00000623083 1397 ntBASIC13.63□□□□□ -0.23
CX3CR1P49238 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CX3CR1P49238 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CX3CR1P49238 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CX3CR1P49238 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms