Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.28■□□□□ 0.52
TNNI2P48788 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.28■□□□□ 0.52
TNNI2P48788 ACTG1P17-201ENST00000558391 1119 ntBASIC18.28■□□□□ 0.52
TNNI2P48788 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.28■□□□□ 0.52
TNNI2P48788 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.28■□□□□ 0.52
TNNI2P48788 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.28■□□□□ 0.52
TNNI2P48788 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.28■□□□□ 0.52
TNNI2P48788 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.28■□□□□ 0.52
TNNI2P48788 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
TNNI2P48788 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNNI2P48788 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.28■□□□□ 0.52
TNNI2P48788 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNNI2P48788 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TNNI2P48788 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNNI2P48788 AL513523.2-202ENST00000427283 2040 ntBASIC18.28■□□□□ 0.52
TNNI2P48788 AC018695.7-201ENST00000624587 2492 ntBASIC18.28■□□□□ 0.52
TNNI2P48788 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNNI2P48788 AL603832.2-201ENST00000566195 2125 ntBASIC18.28■□□□□ 0.52
TNNI2P48788 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.28■□□□□ 0.52
TNNI2P48788 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TNNI2P48788 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNNI2P48788 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNNI2P48788 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNNI2P48788 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNNI2P48788 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNNI2P48788 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.27■□□□□ 0.52
TNNI2P48788 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TNNI2P48788 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNNI2P48788 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TNNI2P48788 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.27■□□□□ 0.52
TNNI2P48788 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNNI2P48788 FER1L4-210ENST00000615531 5998 ntBASIC18.27■□□□□ 0.52
TNNI2P48788 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TNNI2P48788 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNNI2P48788 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
TNNI2P48788 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.27■□□□□ 0.52
TNNI2P48788 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.27■□□□□ 0.52
TNNI2P48788 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.27■□□□□ 0.52
TNNI2P48788 BX284668.4-201ENST00000453917 508 ntBASIC18.27■□□□□ 0.52
TNNI2P48788 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.27■□□□□ 0.52
TNNI2P48788 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.27■□□□□ 0.52
TNNI2P48788 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.27■□□□□ 0.52
TNNI2P48788 AC244157.2-201ENST00000616239 1006 ntBASIC18.27■□□□□ 0.52
TNNI2P48788 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNNI2P48788 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNNI2P48788 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNNI2P48788 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNNI2P48788 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNNI2P48788 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNNI2P48788 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
TNNI2P48788 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TNNI2P48788 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.27■□□□□ 0.51
TNNI2P48788 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
TNNI2P48788 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNNI2P48788 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TNNI2P48788 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
TNNI2P48788 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TNNI2P48788 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNNI2P48788 PCDHA1-201ENST00000378133 2726 ntBASIC18.27■□□□□ 0.51
TNNI2P48788 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TNNI2P48788 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TNNI2P48788 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.27■□□□□ 0.51
TNNI2P48788 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TNNI2P48788 AC026691.1-201ENST00000602502 2017 ntBASIC18.27■□□□□ 0.51
TNNI2P48788 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TNNI2P48788 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TNNI2P48788 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNNI2P48788 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNNI2P48788 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.26■□□□□ 0.51
TNNI2P48788 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TNNI2P48788 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNNI2P48788 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNNI2P48788 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNNI2P48788 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNNI2P48788 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.26■□□□□ 0.51
TNNI2P48788 HSPB1P2-201ENST00000448722 546 ntBASIC18.26■□□□□ 0.51
TNNI2P48788 AC005077.2-201ENST00000449786 690 ntBASIC18.26■□□□□ 0.51
TNNI2P48788 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.26■□□□□ 0.51
TNNI2P48788 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TNNI2P48788 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNNI2P48788 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TNNI2P48788 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
TNNI2P48788 AL021578.1-201ENST00000613646 709 ntBASIC18.26■□□□□ 0.51
TNNI2P48788 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.26■□□□□ 0.51
TNNI2P48788 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNNI2P48788 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNNI2P48788 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TNNI2P48788 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
TNNI2P48788 AL023775.1-201ENST00000454907 1746 ntBASIC18.26■□□□□ 0.51
TNNI2P48788 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TNNI2P48788 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNNI2P48788 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNNI2P48788 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TNNI2P48788 AC007787.1-201ENST00000588095 1583 ntBASIC18.25■□□□□ 0.51
TNNI2P48788 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TNNI2P48788 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNNI2P48788 KRT8P14-201ENST00000414254 1442 ntBASIC18.25■□□□□ 0.51
TNNI2P48788 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TNNI2P48788 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNNI2P48788 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms